Moreover, the Weibull distribution employed to modify the exploration function. Here \(W_{T \rightarrow R} \rightarrow R^{C\times C}\). Comput. The combination of Conv. 1. In order to obtain a linear input sequence, the input image needs to be divided into patches of fixed size, and linear embedding and position embedding are performed for each patch and then input to the standard Transformer encoder. Also, WOA algorithm showed good results in all measures, unlike dataset 1, which can conclude that no algorithm can solve all kinds of problems. COVID-19 image classification using deep features and fractional-order marine predators algorithm. Classification and detection of COVID-19 X-Ray images based on … (3). Cybern.https://doi.org/10.1007/s13042-022-01676-7 (2022). The trend and amplitude of the curve are excellent, which verifies the stability of the RMT-Net model. \end{aligned} \end{aligned}$$, $$\begin{aligned} WF(x)=\exp ^{\left( {\frac{x}{k}}\right) ^\zeta } \end{aligned}$$, $$\begin{aligned}&Accuracy = \frac{\text {TP} + \text {TN}}{\text {TP} + \text {TN} + \text {FP} + \text {FN}} \end{aligned}$$, $$\begin{aligned}&Sensitivity = \frac{\text {TP}}{\text{ TP } + \text {FN}}\end{aligned}$$, $$\begin{aligned}&Specificity = \frac{\text {TN}}{\text {TN} + \text {FP}}\end{aligned}$$, $$\begin{aligned}&F_{Score} = 2\times \frac{\text {Specificity} \times \text {Sensitivity}}{\text {Specificity} + \text {Sensitivity}} \end{aligned}$$, $$\begin{aligned} Best_{acc} = \max _{1 \le i\le {r}} Accuracy \end{aligned}$$, $$\begin{aligned} Best_{Fit_i} = \min _{1 \le i\le r} Fit_i \end{aligned}$$, $$\begin{aligned} Max_{Fit_i} = \max _{1 \le i\le r} Fit_i \end{aligned}$$, $$\begin{aligned} \mu = \frac{1}{r} \sum _{i=1}^N Fit_i \end{aligned}$$, $$\begin{aligned} STD = \sqrt{\frac{1}{r-1}\sum _{i=1}^{r}{(Fit_i-\mu )^2}} \end{aligned}$$, https://doi.org/10.1038/s41598-020-71294-2. Position Embedding performs a linear transformation (that is, the fully connected layer) on each two-dimensional sequence, and compresses the two-dimensional sequence into a one-dimensional feature vector. Sci. Experiments show that the performance of Multi-MedVit is better than that of VGG16, ResNet50 and other CNN-based methods. Whereas, FO-MPA, MPA, HGSO, and WOA showed similar STD results. These models based on global attention have become an effective method of medical diagnosis because they can learn the dependencies of global features. By submitting a comment you agree to abide by our Terms and Community Guidelines. A comprehensive study on classification of COVID-19 on ... - Nature WebThis study aims to examine the severity of this problem by evaluating deep learning (DL) classification models trained to identify COVID-19–positive patients on 3D computed tomography (CT) datasets from different countries. Google Scholar. The Weibull Distribution is a heavy-tied distribution which presented as in Fig. Wang, L., Lin, Z. Q. The encoder of this algorithm consists of two branches: one to process the original image and the other to process the enhanced original image. G.H. The results are the best achieved compared to other CNN architectures and all published works in the same datasets. Xie, X. et al. Chaos Solitons Fractals 142, 110495 (2021). While no feature selection was applied to select best features or to reduce model complexity. where \(R_L\) has random numbers that follow Lévy distribution. They are distributed among people, bats, mice, birds, livestock, and other animals1,2. Yaqoob et al.16 proposed a deep learning pipeline based on vision transformer that can accurately diagnose COVID-19 from chest CT images. Article Heidari, A. We have used RMSprop optimizer for weight updates, cross entropy loss function and selected learning rate as 0.0001. M.A.E. CAS Sign up for the Nature Briefing newsletter — what matters in science, free to your inbox daily. More so, a combination of partial differential equations and deep learning was applied for medical image classification by10. Chest ct for typical 2019-ncov pneumonia: Relationship to negative rt-pcr testing. However, the proposed FO-MPA approach has an advantage in performance compared to other works. This dataset consists of lung CT scans with COVID-19 related findings, as well as without such findings. Experimental results show that this method is superior to using CNN architecture to detect COVID-19 on CXR images, and can effectively identify infected areas of COVID-19.Yang et al.15 proposed covid-vision-transformer (CovidViT), applying transformer architecture and self-focus mechanisms to Covid-19 diagnosis. 2. As can be seen from Table 3, the model size of RMT-Net is about 40M, which is smaller than the other four models. Gupta, P. et al. Radiomics: extracting more information from medical images using advanced feature analysis. Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. Li, J. et al. Evaluation measures of the classification performance of imbalanced data sets. Google Scholar. et al. Very deep convolutional networks for large-scale image recognition. Accession codes.The proposed RMT-Net backbone network is available publicly for open accessat RMT-Net source. In this study, images belonging to six situations, including coronavirus images, are classified using a two-stage data enhancement approach. The binary and multi-class classification of X-ray images tasks were performed by utilizing enhanced VGG16 deep transfer learning architecture. Table 3 shows the numerical results of the feature selection phase for both datasets. In X-ray images, the accuracy of RMT-Net on the test set was 96.75%, and its specificity was improved by 1.02%, sensitivity by 5.24%, and accuracy by 4.51% compared with ResNet-50.On CT images, RMT-Net achieved 99.12% accuracy on the test set, with specificity improved by 3.2%, sensitivity improved by 3.28%, and accuracy improved by 3.87% compared to ResNet-50. Each head outputs a sequence of size X, and then concatenates the h sequences into an \(n\times d\) sequence, as the output of LMHSA. Apostolopoulos, I. D. & Mpesiana, T. A. Covid-19: Automatic detection from x-ray images utilizing transfer learning with convolutional neural networks. 18, 2775–2780 (2021). & Wang, W. Medical image segmentation using fruit fly optimization and density peaks clustering. In addition to comparing the training and validation results of the model, the evaluation indicators include the model size, specificity, sensitivity and detection accuracy. Memory FC prospective concept (left) and weibull distribution (right). Stem transforms image \(x \in R^{H\times W \times C}\)into two-dimensional image patches \(x_p \in R^{N \times (p^2 \times C)}\) , which can be regarded as \(N=(H \times W)\div P^2\)flattened two-dimensional sequence blocks, and the dimension of each sequence block is \(P^2 \times C\) . & Pouladian, M. Feature selection for contour-based tuberculosis detection from chest x-ray images. It is proved that the model can detect and classify COVID-19 with higher accuracy and efficiency. In order to enhance the migration and generalization ability, RMT-Net adopts the backbone of ResNet-50 with four different stages to extract features with different scales. J. Sens. Also, they require a lot of computational resources (memory & storage) for building & training. Med. Simonyan, K. & Zisserman, A. Scientific Reports (Sci Rep) Syst. The proposed approach selected successfully 130 and 86 out of 51 K features extracted by inception from dataset 1 and dataset 2, while improving classification accuracy at the same time. Biocybern. The MLP contains the GELU activation function and two fully connected layers. Quan, H. et al. It can be concluded that FS methods have proven their advantages in different medical imaging applications19. We adopt a special type of CNN called a pre-trained model where the network is previously trained on the ImageNet dataset, which contains millions of variety of images (animal, plants, transports, objects,..) on 1000 classe categories. These networks are: (1) … Training, verification and testing are carried out on self-built datasets. COVID-Classifier: an automated machine learning model to In Proceedings of the IEEE Conference on Computer Vision and Pattern Recognition, 770–778 (2016). J. Med. The evaluation outcomes demonstrate that ABC enhanced precision, and also it reduced the size of the features. 152, 113377 (2020). Adv. Dhanachandra, N. & Chanu, Y. J. where CF is the parameter that controls the step size of movement for the predator. Med. The evaluation confirmed that FPA based FS enhanced classification accuracy. A COVID-19 medical image classification algorithm based on So, transfer learning is applied by transferring weights that were already learned and reserved into the structure of the pre-trained model, such as Inception, in this paper. Guo, J. et al. The data was collected mainly from retrospective cohorts of pediatric patients from Guangzhou Women and Children’s medical center. where \(ni_{j}\) is the importance of node j, while \(w_{j}\) refers to the weighted number of samples reaches the node j, also \(C_{j}\) determines the impurity value of node j. left(j) and right(j) are the child nodes from the left split and the right split on node j, respectively. Tree based classifier are the most popular method to calculate feature importance to improve the classification since they have high accuracy, robustness, and simple38. In this experiment, the selected features by FO-MPA were classified using KNN. Sci Rep 10, 15364 (2020). Aiming at the problem of insufficient classification accuracy of COVID-19 X-ray and CT images, this paper proposes a fast and accurate RMT-Net, which is a novel deep learning network based on ResNet-50 merged Transformer. The MPA starts with the initialization phase and then passing by other three phases with respect to the rational velocity among the prey and the predator. Deep learning for COVID-19 detection based on CT images They applied the SVM classifier with and without RDFS. In recent years, medical images analysis has been widely used in the diagnosis field due to its non-invasive and fast. Dhanachandra and Chanu35 proposed a hybrid method of dynamic PSO and fuzzy c-means to segment two types of medical images, MRI and synthetic images. The resulting raster from image … GitHub - youngsoul/pyimagesearch-covid19-image-classification: … In this work, the MPA is enhanced by fractional calculus memory feature, as a result, Fractional-order Marine Predators Algorithm (FO-MPA) is introduced. The related algorithms based on deep learning are recognized as the most effective approach to implement image classification of quantitatively and qualitatively with advantages of the workload reduction and misdiagnosis decrease by manual diagnosis5,6. Apostolopoulos, I. D. & Mpesiana, T. A. Covid-19: automatic detection from x-ray images utilizing transfer learning with convolutional neural networks. The proposed approach was evaluated on two public COVID-19 X-ray datasets which achieves both high performance and reduction of computational complexity. In Dataset 2, FO-MPA also is reported as the highest classification accuracy with the best and mean measures followed by the BPSO. Equation (1)is the calculation process of each part. In this paper, filters of size 2, besides a stride of 2 and \(2 \times 2\) as Max pool, were adopted. As a result, the obtained outcomes outperformed previous works in terms of the model’s general performance measure. Radiology 295, 685 (2020). Image segmentation is a necessary image processing task that applied to discriminate region of interests (ROIs) from the area of outsides. Covid-ct-dataset: A ct scan dataset about covid-19. The numbers in bracket of the third column represents 2, 3, and 4 categories. Eng. Lambin, P. et al. CAS & Ullah, K. Detection of covid-19 in high resolution computed tomography using vision transformer. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. This paper introduces a lightweight Convolutional Neural Networks (CNN) method for image classification in COVID-19 diagnosis. (5). 41, 9–23 (2019). The combination of SA and GA showed better performances than the original SA and GA. Narayanan et al.33 proposed a fuzzy particle swarm optimization (PSO) as an FS method to enhance the classification of CT images of emphysema. Control 68, 102588 (2021). Then, applying the FO-MPA to select the relevant features from the images. Rahimzadeh, M., Attar, A. They also used the SVM to classify lung CT images. With the deepening of the network, the number of features gradually increases. The above is the calculation process of VT. VT can readjust the input feature map according to the semantic importance, and provide the basis for subsequent classification by focusing on favorable semantic information. Chestx-ray8: Hospital-scale chest x-ray database and benchmarks on weakly-supervised classification and localization of common thorax diseases. It achieved accuracy of 96.75% on X-ray images. arXiv preprint arXiv:1409.1556 (2014). Narayanan, S. J., Soundrapandiyan, R., Perumal, B. Brain tumor segmentation with deep neural networks. Propose a novel robust optimizer called Fractional-order Marine Predators Algorithm (FO-MPA) to select efficiently the huge feature vector produced from the CNN. Wang, X. et al. 4. The calculation process of LMHSA module can be expressed as Eq. Abadi, M. et al. 142, 105244 (2022). The updating operation repeated until reaching the stop condition. (8) can be remodeled as below: where \(D^1[x(t)]\) represents the difference between the two followed events. The training, validation and testing experiments were undertaken on the platform of Intel Core i7-9700k with Windows 10 64-bit operating system and NVIDIA GeForce GTX 1080Ti GPU. Al-qaness, M. A., Ewees, A. Okolo, G. I., Katsigiannis, S. & Ramzan, N. Ievit: An enhanced vision transformer architecture for chest x-ray image classification. The explainable model showed the importance of the middle left and superior right lung zones in classifying COVID-19 pneumonia from … 121, 103792 (2020). Stage 2: The prey/predator in this stage begin exploiting the best location that detects for their foods. The first one is based on Python, where the deep neural network architecture (Inception) was built and the feature extraction part was performed. Based on Standard Deviation measure (STD), the most stable algorithms were SCA, SGA, BPSO, and bGWO, respectively. Automated COVID-19 diagnosis with DL algorithms can be performed using data of various imaging modalities. K.R., X.C and Z.W wrote the main manuscript text. In this paper, we present feasible solutions for detecting … Radiology 295, 22–23 (2020). If you find something abusive or that does not comply with our terms or guidelines please flag it as inappropriate. For example, Lambin et al.7 proposed an efficient approach called Radiomics to extract medical image features. The classification accuracy of MPA, WOA, SCA, and SGA are almost the same. They used K-Nearest Neighbor (kNN) to classify x-ray images collected from Montgomery dataset, and it showed good performances. Therefore, modeling these high-level semantics independently can be a waste of computational resources. Sci. Mukherjee, H. et al. Biol. Attention is all you need. \(W_Q \in R^{C\times C}\) ,\(W_K \in R^{C\times C}\) represents the learning weight of Q and K. The result of the multiplication of K and Q determines how the information from visual tokens is projected into the original feature map. Artif. In this paper, different Conv. kharrat and Mahmoud32proposed an FS method based on a hybrid of Simulated Annealing (SA) and GA to classify brain tumors using MRI. COVID-19 Image Classification Covid-19 detection in ct/x-ray imagery using vision transformers. Accordingly, the prey position is upgraded based the following equations. (8) at \(T = 1\), the expression of Eq. MATH image COVID-19 lung CT image segmentation using deep learning … Comput. layers is to extract features from input images. Correspondence to In this paper, we proposed a novel COVID-19 X-ray classification approach, which combines a CNN as a sufficient tool to extract features from COVID-19 X-ray images. As shown in Eq. Therefore, VIT is used for global feature inference in Stage 1. To obtain As shown in Table 4, the RMT-Net proposed in this paper achieves better classification results than other models in both the four-classification of X-ray images and the second-classification of CT images. Figure 7 shows the most recent published works as in54,55,56,57 and44 on both dataset 1 and dataset 2. Fractional Differential Equations: An Introduction to Fractional Derivatives, Fdifferential Equations, to Methods of their Solution and Some of Their Applications Vol. In Proceedings of the IEEE Conference on computer vision and pattern recognition workshops, 806–813 (2014). Article Netw. & Unlersen, M. F. Covid-19 diagnosis using state-of-the-art cnn architecture features and bayesian optimization. Classification High accuracy … Ozturk, T. et al. Sixteen pretrained CNNs were investigated in this study for the classification of whole CT images to differentiate COVID-19 from non-COVID-19. 9, 674 (2020). Finally, the predator follows the levy flight distribution to exploit its prey location. Sosososo. In X-ray image classification, the accuracy rate of RMT-Net is 97.65 models. In the fourth stage, the residual blocks are used to extract the details of feature. Sharif Razavian, A., Azizpour, H., Sullivan, J. Johnson et al.31 applied the flower pollination algorithm (FPA) to select features from CT images of the lung, to detect lung cancers. Conclusion As we are aware, the world is now struggling to contain the spread of the new mutant strain of the COVID-19 virus, theoretically supposed to have a 70% more transmission rate. Can ai help in screening viral and covid-19 pneumonia? Comput.https://doi.org/10.1007/s12559-020-09775-9 (2021). https://keras.io (2015).
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